• Name
• Description
• Inherits from
• Attributes
• Methods
  • Standard methods
  • Writing methods
• POD ERRORS

Name

SWISS::Ref.pm

Description

SWISS::Ref represents a single reference of a SWISS-PROT + TREMBL entry as specified in the user manual http://www.expasy.org/sprot/userman.html .

Inherits from

SWISS::BaseClass.pm

Attributes

RN

The reference number.

RP

The RP line(s), unwrapped as a string.

RC

Zero or more RC lines.

Data structure: {Token}[qualifier1, qualifierN].

A hash of arrays. Hash keys are the RC tokens, array elements are the qualifiers for that token.

RX

References to bibliographic databases.

Data structure: {Database}[identifier1, identifierN].

A hash of arrays. Hash keys are the names of bibliographic databases, array elements are the identifiers of the reference for that database.

RG

The RG line(s), unwrapped as a string.

RA

The list of Authors.

An object of type SWISS::ListBase.

RT

The publication title, unwrapped as a string.

RL

The RL line.

Data structure: String.

Methods

Standard methods

new

fromText

toText

Writing methods

add_MedlineID

Add a RX line 'MEDLINE; nnnnnnnn.' to the reference.

add_Author

Add an author to the RA line of the reference.

rc_sort

Sort elements of the RC line alphabetically.

POD ERRORS

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Around line 542:

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